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List of tests available

Alphabetical List of Antibodies and Probes Available
Immunohistochemistry and In Situ Hybridizasion on Paraffin Sections
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*Note: In Situ Hybridization stains are in Bold                 

Name (Antibody or Probe)             Common Applications 

α-smooth muscle actin (SMA)

Smooth muscle or myofibroblastic differentiation

α-1 antichymotrypsin

Outdated histiocytic marker

α-1 antitrypsin

α-1 antitrypsin deficiency (liver tissue)

ACTH

Pituitary tumors

Actin, smooth muscle (SMA)

Smooth muscle or myofibroblastic differentiation

Actin, muscle-specific (MSA) (HHF-35)

Smooth muscle and skeletal muscle differentiation

Adenovirus

Adenovirus infection

AFP

Hepatoma, Hepatoid Carcinoma, Yolk sac tumors

ALK-1

ALK-1 positive lymphoma

AMACR (P504S)

Prostate cancer diagnosis, also other carcinomas

Amebiasis (E. Histolytica)

Ambeiasis – cross reacts with  histiocytes, so order CD68 with it

Amyloid AA protein

Amyloid subtyping

Amyloid P protein

Amyloid subtyping (also stains normal elastic tissue)

Androgen Receptor

Metastatic carcinoma unknown primary

Annexin A1

Hairy cell leukemia, T-cells, myeloid cells

AP12 (MALT) (FISH)

t(11:18) (q21;q21)

Arginase-1

Hepatocellular carcinoma, hepatoid differentiation

b-catenin

Fibromatosis, metastatic carcinoma unknown primary

BAF47 (INI1)

Epithelioid sarcoma, teratoid/rhabdoid tumor, MPNST

Bartonella Henselae

Cat scratch disease organism

B72.3

Mesothelioma vs. adenocarcinoma

BCL-1

Same as Cyclin D1

BCL-2

Lymphoma typing, soft tissue tumors

BCL-6

Lymphoma typing

Ber-EP4

Mesothelioma vs. adenocarcinoma

BG-8

Mesothelioma vs. adenocarcinoma

BK virus

Marker of BK Polyomavirus infection

Bob.1

B-cells, plasma cells

Brachyury

Chordoma, Hemangioblastoma

BRST-1 (BCA-225)

Some epithelial tumors

c-MYC probes (FISH)

Burkitt lymphoma

C4d

Used for assessment of rejection in transplant bxs

C9

Diagnosis of myocardial infarction (used with troponin T)

c-kit (CD117)

Gastrointestinal stromal tumors, mast cells

CA-125

Multiple epithelial tumors, also in mesothelial cells

CA19-9

Metastatic carcinoma unknown primary

Calcitonin

Medullary carcinoma thyroid

Caldesmon

Smooth muscle differentiation

Calponin

Smooth muscle differentiation, myoepithelial cells

Calretinin

Mesothelioma, adrenal cortical tumors, sex cord stromal
tumors

Cat Scratch Disease

Bartonella henselae infection

Cathepsin K

TFEB translocation-associated renal cell carcinomas

CD1a

Thymic T-cells, thymoma, Langerhans cells

CD2 T-cells)

Lymphoma/leukemia typing

CD3 (T-cells)

Lymphoma/leukemia typing

CD4 (T-helper, inducer)

Lymphoma/leukemia typing

CD5 (T-cells)

Lymphoma/leukemia typing (damaged by B5)

CD7 (T-cells)

Lymphoma/leukemia typing

CD8 (T-suppressor/cytotoxic)

Lymphoma/leukemia typing

CD10 (CALLA)

Lymphoma typing, DFSP vs DF, endometrial stromal tumors

CD11c

Leukemia typing, hairy cell leukemia

CD13

Leukemia typing, myeloid marker

CD15

Lymphoma typing, mesothelioma vs. adenocarcinoma

CD20 (L26)

Lymphoma/leukemia typing

CD21

Follicular dendritic cells, lymphoma typing

CD23

Lymphoma/leukemia typing

CD25 (IL-2)

Lymphoma/leukemia typing

CD30 (Ki-1)

Lymphoma typing

CD31

Vascular differentiation, some histiocytes

CD33

Monocytic marker

CD34

Soft tissue tumor classification, leukemia typing

CD38

Plasma cell differentiation (does not work well on B5)

CD43 (MT1)

Lymphoma/leukemia typing

CD44

Burkitt vs non-Burkitt, carcinoid prognosis

CD45 (LCA)

Recognition of lymphohematopoetic tumors

CD45RA (4KB5)

Lymphoma/ leukemia typing

CD45RB

Lymphoma/ leukemia typing

CD45RO (UCHL1)

Lymphoma typing (T-cells, some myeloid cells)

CD45RO (OPD4)

Lymphoma typing

CD56 (NCAM)

Lymphoma typing, neuroendocrine differentiation

CD57 (NK-1, Leu 7)

Lymphoma typing, neuroendocrine differentiation

CD61

Megakaryocytes, megakaryocytic leukemia

CD68 (KP1)

Histiocytic/myeloid/monocytic marker

CD68 (PG-M1)

Histiocytic/monocytic marker

CD71 (transferrin receptor)

Erythroid cells, some lymphomas

CD74 (LN-2, B-cells)

Lymphoma typing

CD79a (B-cells)

Lymphoma/leukemia typing

CD82 (KAI-1)

Kidney tumor typing

CD99 (MIC-2)

Soft tissue tumor classification

CD117 (c-kit)

Gastrointestinal stromal tumors, mast cells, blasts

CD123

Lymphoma typing – plasmacytoid dendritic cell tumors

CD138

Plasma cells (also stains many epithelial tumors)

CD 163 Histiocytic - Monocytic marker

CDK4

Liposarcoma

CDX2

Metastatic carcinoma unknown primary

CEA (clone COL-1)

Mesothelioma vs. adenocarcinoma, metastatic ca. unknown primary

CEA (polyclonal)

Hepatoma vs. adenocarcinoma (use COL1 for other applications)

c-erbB2 (HER2)

HER2 overexpression

Chromogranin

Neuroendocrine differentiation

Claudin-1

Perineurioma

Claudin-5

Endothelial marker

Clusterin

Lymphoma typing,  follicular dendritic marker

CMV

Cytomegalovirus infection

Coccidioidomycosis

Coccidiodomyosis infection (cross reacts w Histoplasmosis)

Collagen IV

Soft tissue tumor classification

Cryptococcus

Crytococcus neoformans infection

Cyclin D1

Mantle cell lymphoma

Cytokeratin 5

Mesothelioma, squamous carcinoma

Cytokeratin 7

Metastatic carcinoma unknown primary

Cytokeratin 14

Oncocytic tumors

Cytokeratin 15

Useful for diagnosis of cutaneous adnexal tumors

Cytokeratin 17

Metastatic carcinoma unknown primary

Cytokeratin 19

Papillary thyroid carcinoma, prognostic marker in islet cell tumors

Cytokeratin 20

Metastatic carcinoma unknown primary

Cytokeratin AE1/AE3

Epithelial tumors, hepatoma vs. adenocarcinoma (NOT
a “Pan-CK”)

Cytokeratin HMW (34bE12)

Metastatic carcinoma unknown primary, prostate basal cells

Cytokeratin LMW (8,18)

Epithelial tumors, especially renal, prostate, hepatoma

CXCL13

Angioimmunoblastic T-cell lymphoma

D2-40 (podoplanin)

Mesothelioma, lymphatics, seminoma

DBA.44

Hairy cell leukemia, some marginal zone lymphomas

Desmin

Smooth and skeletal muscle differentiation

DOG1

Gastrointestinal stromal tumor (GIST) marker (better than
c-kit, CD117)

EBV (EBER probe)

In-situ hybridization stain for EBV

EBV (LMP-1)

Epstein-Barr virus infection

E-Cadherin

Lobular vs. Ductal breast carcinoma, erythroid precursors

E. Histolytica

Amebiasis- cross reacts with histiocytes, so order CD68 with it

EGFR (pharmDx)

Erbitux eligibility (FDA-approved test)

EGFR (31G7)

Sweat gland carcinoma, squamous tumors

EGFR amplification (FISH)

EGFR gene amplification status

EMA

Metastatic carcinoma of unknown primary, Lymphoma typing

Emerin

Useful for highlighting nuclear membrane in papillary ca thyroid

ERCC1

Prognostic marker in non-small cell lung carcinoma

ERG

Endothelial marker (stains nuclei), subset of prostate carcinoma

Estrogen receptor

Breast cancer prognostic marker, metastatic carcinoma
unknown primary

EWSR1 probe (FISH)

Ewing/ PNET, DSRCT, clear cell sarcoma, extraskel
myxoid chondrosarc

Factor VIII

Megakaryocytic marker, endothelial marker

Factor XIIIa

Dermatofibroma vs. DFSP

Fascin

Hodgkin’s cells, other reticulum cells

FLI-1

Ewing’s sarcoma, vascular tumors, lymphoblastic lymphoma

FSH

Pituitary tumors

FUS probe (FISH)

Low grade fibromyxoid sarcoma, angiomatoid MFH,
myxoid liposarc

Galectin-3

Papillary thyroid carcinoma

Gastrin

Gastrinomas

GCDFP-15

Breast carcinoma, sweat gland, salivary gland marker

GFAP

Glial tumors, salivary gland tumors

GH

Pituitary tumors

Giardia

Giardia lamblia infection

Glucagon

Pancreatic endocrine tumors

GLUT-1

Perineurioma

Glycophorin A

Erythroid marker

Glypican 3

Yolk sac tumor, hepatoma, hepatoid adenocarcinoma

Granzyme B

Lymphoma typing

H. Pylori

Helicobacter pylori infection

HBME-1

Chordoma, papillary thyroid carcinoma

HbsAg

Hepatitis B surface antigen

HCG

Choriocarcinoma

Hemoglobin

Erythroid marker

HER-1

Same as EGFR

HepPar1

Hepatoma, gastric carcinoma

HER2 immunostain

HER2 protein overexpression

HER2 by FISH

HER2 gene amplification status

Herpes Simplex I & II

Herpesvirus I and II infection

HHV8 (KSHV)

Kaposi’s sarcoma, some cases Castleman’s, lymphoma

Histoplasmosis

Histoplasmosis capsulatum infection (also stains other fungi)

HIV (p24-gag)

Detects HIV only in tissues that contain follicular dendritic cells

HLA-Dr (LN3)

Leukemia typing

HLA-G

Intermediate trophoblasts (chorioca, other)

HMB-45

Melanoma marker, angiomyolipoma and other PEComas

HPL

Germ cell tumors, trophoblastic tumors

HPV-Pan

In-situ hybridization stain, detects  HPV types 6, 11, 16, 18, 31,
33, 35, 51

HPV, types 6/11

In-situ hybridization stain

HPV, types 16/18

In-situ hybridization stain

HPV, types 31/33/51

In-situ hybridization stain

IgA

Plasma cell subclassification

IgG

Plasma cell subclassification

IgG4

IgG4-related sclerosing diseases

IgM

Plasma cell subclassification

IgH-MALT1 (MALT) (FISH)

t(14;18) (q32;q21)

IL-2 (CD25)

Lymphoma/leukemia typing

IMP3 (L523S, KOC)

Dysplasia marker, marker of serous carcinoma

Inhibin

Adrenal cortical tumors, sex-cord stromal tumors

INI-1 (BAF47)

Epithelioid sarcoma, teratoid/rhabdoid tumor, MPNST

Insulin

Pancreatic endocrine tumors

Kappa light chains

Plasma cell clonality

Ki-67 (clone K2)

Proliferative fraction, viable fat cell membranes, lipoblasts

Ki-67 (clone MIB-1)

Proliferative fraction, hyalinizing trabecular tumor of thyroid

Kit

Same as c-kit, CD117

Ki-67 (clone SP6)

Proliferative fraction

KOC (L523S, IMP3)

Dysplasia marker, marker of serous ca

L523S (KOC, IMP3)

Dysplasia marker, marker of serous ca

Lambda light chains

Plasma cell clonality

Laminin

Basement membrane marker

LAT

T-cells

LCA (CD45)

Lymphohematopoetic tumors

LEF-1 Marker of SLL/CLL

LH   

Pituitary tumors

Lipase

Acinar cell tumor of pancreas, other

LN3 (HLA-Dr)

Leukemia typing

Lysozyme

Myeloid and histiocytic marker

MALT probes (FISH)

MALT lymphomas, 3 probes, API2/MALT1 t(1118)
(q21q21), IgH/MALT1 t(1418), and BCL6 breakapart
probe

Mammaglobin

Breast marker, salivary glands, sweat glands

MART-1 (clone A103)

Melanoma, adrenal cortical tumors, sex cord-stromal tumors,
PEComas

MART-1 (M2-7C10+M29E3)

Melanoma, angiomyolipoma and other PEComas

Mast cell tryptase

Mastocytosis

MDM2

Liposarcoma

Mesothelin (clone 5B2)

Mesothelioma, serous carcinoma, squamous carcinoma

MIC-2 (CD99)

Soft tissue tumor classification

MiTF

Melanoma, thyroid tumors, many soft tissue tumors

Mitochondria

Oncocytic tumors

MLH1

Hereditary cancer syndromes, mismatch repair gene mutations

MOC-31

Mesothelioma vs. adenocarcinoma 

MSA (muscle-specific actin)

HHF-35, smooth muscle and skeletal muscle

MSH2

Hereditary colon cancer syndrome, mismatch repair
gene mutations

MSH6

Hereditary colon cancer syndrome, mismatch repair
gene mutations

MUC1

Paget’s disease

MUC2

Ovarian mucinous carcinoma vs. colorectal carcinoma

MUC4

Marker of low grade fibromyxoid sarcoma

MUC5AC

Ovarian mucinous carcinoma vs. colorectal carcinoma

MUC6

Seminal vesicle marker, serous neoplasms of pancreas

MUM1

Lymphoma typing

MYC Protein IHC Assists in diagnosis of Burkitt lymphoma

Mycobacteria

Mycobacteria (typical and atypical) (vendor has D/C’d antibody)

MYC probes (FISH)

Burkitt lymphoma

Myeloperoxidase

Myeloid and histiocytic marker

Myogenin

Rhabdomyosarcoma

Myosin Heavy Chain Smooth muscle and myeopithelial marker

Myosin, smooth muscle

Myoepithelial marker, smooth muscle differentiation

N-Cadherin

Metastatic carcinoma unknown primary

Napsin A

Lung carcinoma, alveolar macrophages, some renal cell carcinomas

NeuN

Neuronal marker

Neurofilament

Neural tumors, occasional non-neural tumors

NGFR

Soft tissue tumor classification

NKI-C3

Melanoma, neural marker, lysosomal marker

NPM

AML subset

NKX3.1

Sensitive and specific nuclear marker of prostate carcinoma

NSE

Worthless marker, don’t use it

NUT

Marker of NUT positive midline carcinomas

Oct2

Lymphoma typing

OCT3/4

Seminoma, embryonal carcinoma

Osteonectin

Osteosarcoma, also other sarcomas (not bone-specific)

p16 (INK4)

Cervical dysplasia, HPV-associated head and neck squamous
carcinomas

P24-gag

Detects HIV only in tissues that contain follicular dendritic cells

P501S (Prostein)

Prostate marker

P504S (AMACR)

Prostate cancer diagnosis

P504S / p63 cocktail

Prostate cancer diagnosis

p53

p53 tumor suppressor gene mutations

p57

Molar pregnancy (in conjunction with Ki-67)

p63

Myoepithelial, prostatic basal cell, squamous marker

P63/ P504S cocktail

Prostate cancer diagnosis

Pancreatic polypeptide

Pancreatic endocrine tumors

Parathyroid hormone (PTH)

Parathyroid tumors

Parvovirus

Parvovirus B19 infection

Parathyroid hormone (PTH)

Parathyroid tumors

Parvovirus

Parvovirus B19 infection

Pax-2

Renal cell carcinoma, serous carcinoma, lymphoid cells

Pax-5 (B-cells)

B-cells, some neuroendocrine tumors

Pax-8

Kidney, thyroid, female genital tract carcinomas, some
lymphoid cells

PCP (Pneumocystis carinii)

Pneumocystis carinii infection

PD-1 Assist in dx of angioimmunoblastic lymphoma

PDEGF

Platelet-derived epidermal growth factor

PDGFR-alpha

Diagnosis of c-kit negative GISTs (DOG1 is better for this)

PDX1 Pancreatic tumors

Perforin

Lymphoma typing

PE-10 (SP-A)

Lung adenocarcinoma and some thyroid carcinomas

PGP9.5

Neural/neuroendocrine marker

PHH3

Mitosis marker

Placental S100 (S100P)

Benign vs malignant pancreatic lesions, urothelial ca, other

PLAP

Many carcinomas, also some germ cell tumors

PMS2

Hereditary colon cancer syndrome, mismatch repair gene
mutations

Pneumocystis (PCP)

Pneumocystis carinii infection

Podoplanin (D2-40)

Same as D2-40, mesothelioma, lymphatics, seminoma

Polyomavirus (BK, SV-40)

Marker of BK Polyomavirus infection

Prealbumin (transthyretin)

Choroid plexus tumors, some types of amyloid

Procollagen 1

Fibroblastic differentiation, AFX, also some carcinomas

ProExC

Cervical dysplasia

Progesterone receptor

Breast cancer prognostic marker

Prolactin

Pituitary tumors

Prostein (P501S)

Prostate marker

pS2

Breast prognostic marker

PSA (prostate)

Prostate marker

PSAP (prostate)

Prostate marker (prostatic acid phos), also rectal carcinoid
tumors

PSMA (prostate)

Prostate marker

PTH

Parathyroid tumors

pVHL

Renal tumors, clear cell ca fem gen tract, bile duct marker

RCC (PN-15)

Renal cell carcinoma marker (Pax8 is much more sensitive)

Ret oncoprotein

Ganglion cells

RRM2

Evaluation of urothelial dysplasia

RSV

Respiratory Synctitial Virus

Rocky Mountain Spotted Fever

Rocky Mountain Spotted Fever bug

S100

Melanoma, neural marker, myoepithelial, other

S100P (Placental S100)

Benign vs malignant pancreatic lesions, urothelial ca, other

SALL4

Germ cell tumors, hepatoid adenocarcinoma of stomach

SMA (smooth muscle actin)

Smooth muscle or myofibroblastic differentiation

Smooth muscle myosin

Myoepithelial marker, smooth muscle differentiation

Smoothelin

Used to distinguish muscularis mucosa from detrusor in
bladder bxs

Somatostatin

Pancreatic endocrine tumors

Sox10

Sensitive melanoma marker (better than S100), neural,
myoepithelial

SV-40 (BK, Polyomavirus)

Marker of BK Polyomavirus infection

Synaptophysin

Neuroendocrine differentiation

Syphilis

Treponema pallidum infection

SYT probe, t(X;18) (FISH)

Synovial sarcoma

t(11;14)

Mantle cell lymphoma

t(14;16)

Follicular lymphoma

Tau protein

Alzheimer’s disease

TDT

Lymphoma/leukemia typing, Merkel cell tumors

Telomerase

Identification of cells with telomerase activity

TFE3

Alveolar soft part sarcoma, some renal tumors

Thrombomodulin

Urothelial carcinoma, mesothelioma, squamous tumors

Thyroglobulin

Thyroid carcinoma

TIA-1 (cytotoxic)

Lymphoma typing

TLE-1

Synovial sarcoma, other tumors

Topoisomerase

Prognostic marker

Transthyretin (prealbumin)

Choroid plexus tumors, some types of amyloid

TRAP

Hairy cell leukemia

Troponin T

Diagnosis of myocardial infarction (used with C9)

Trypsin

Acinar cell tumor of pancreas

Tryptase, mast cell

Mast cell marker

TSH

Pituitary tumors

TTF-1

Lung & thyroid marker, also some neuroendocrine tumors

Tyrosinase

Melanoma maker

Ubiquitin

Alzheimer's disease, recognition of Mallory bodies in liver

Urinary FISH panel (FISH on urine)

Cytologic diagnosis of bladder cancer

Varicella Zoster

Varicella Zoster infection

VEGF

Misc tumors

Villin

Metastatic carcinoma unknown primary

Vimentin

Metastatic carcinoma unknown primary

VIP

Pancreatic endocrine tumors

VS38

Plasma cells, plasmacytoid, epithelial cells

Whipple's disease

Whipple's disease

WT-1 (6F-H2)

Mesothelioma and serous carcinoma marker

ZAP-70

CLL prognostication